It's not just you. I have that same problem, and have been working on it. It's not as easy as Christopher makes it look :) What I do is play the chord through slowly checking for intonation of each string at a time for each step. I do just the index finger, and set it until I get the B and E strings, then add the middle finger, then then adjust to ring each string right, then do the last finger. Sometimes, it takes me a full minute or more to get all fingers down to satisfaction lol. But, I'm starting to see that placing slowly and properly is building good muscle memory already to do it quickly.
Quickly advancing from inept to semi-ept